BioSmalltalk
Bioinformatics Library for Pharo Smalltalk
File Explorer
- ci.yml
- AffyHaploViewJoiner.class.st
- AffyPlateJoiner.class.st
- BioAffyProbeSetFormatter.class.st
- NeoCSVWriter.extension.st
- package.st
- ZnBufferedWriteStream.extension.st
- BaselineOfBioSmalltalk.class.st
- package.st
- BioAffyProbeSetRecord.class.st
- BioAffyTXTFormatter.class.st
- NeoCSVWriter.extension.st
- package.st
- ZnCharacterReadStream.extension.st
- BioA31DataSection.class.st
- BioA31DistanceMatrixSubSection.class.st
- BioA31DNASample.class.st
- BioA31FrequencySample.class.st
- BioA31Group.class.st
- BioA31GroupBuilder.class.st
- BioA31HaplotypeSection.class.st
- BioA31INISection.class.st
- BioA31MicrosatSample.class.st
- BioA31ProfileSection.class.st
- BioA31RFLPSample.class.st
- BioA31Sample.class.st
- BioA31SampleCollection.class.st
- BioA31SampleParameters.class.st
- BioA31SamplesSection.class.st
- BioA31Spec.class.st
- BioA31StandardSample.class.st
- BioA31StructureSection.class.st
- BioArlequinFile.class.st
- BioArlequinFormatter.class.st
- package.st
- String.extension.st
- BioA31Samples.class.st
- BioAHaplotypeTest.class.st
- BioArlequinWriterTest.class.st
- package.st
- BioBenchmarkTests.class.st
- BioRandomNumber.class.st
- BioRandomStream.class.st
- BioRepeatStream.class.st
- package.st
- BioBlastFilter.class.st
- BioBlastNullFilter.class.st
- BioBlastWrapper.class.st
- BioNCBIBlastReader.class.st
- BioNCBIBlastWrapper.class.st
- BioNCBIGenBankDownloader.class.st
- BioNCBIGenBankReader.class.st
- BioNCBIGenBankUIReader.class.st
- BioNCBILocalBlastLegacy2223.class.st
- BioNCBILocalBlastWrapper.class.st
- BioNCBIReader.class.st
- BioNCBIWebBlastWrapper.class.st
- BioQBlastReader.class.st
- BioWebBlastResult.class.st
- BioWUBlastWrapper.class.st
- FileSystemDirectoryEntry.extension.st
- package.st
- BioWebBlastSamples.class.st
- package.st
- BioBlastNodeTest.class.st
- BioBlastXMLParserTest.class.st
- BioNCBIBlastClientTest.class.st
- BioNCBIBlastReaderTest.class.st
- BioNCBIBlastUrlTest.class.st
- BioNCBIGenBankReaderTest.class.st
- BioNCBITests.class.st
- BioQBlastParserTest.class.st
- package.st
- BioBinaryClassifier.class.st
- BioBinaryRule.class.st
- BioClassifier.class.st
- BioGroupOrganization.class.st
- BioGroupOrganizationTest.class.st
- BioInitRule.class.st
- BioOrganization.class.st
- BioRule.class.st
- BioRuleBase.class.st
- BioRuleBasedClassifier.class.st
- package.st
- SequenceableCollection.extension.st
- BioClassifierTest.class.st
- package.st
- BioDatabase.class.st
- BioDatabases.class.st
- package.st
- BioDatabasesTest.class.st
- package.st
- BioPDBePISAClient.class.st
- BioPDBePISACmd.class.st
- BioPDBePISACollection.class.st
- BioPDBePISAInterfaces.class.st
- BioPDBePISAMultimers.class.st
- BioPDBePISAPDBMultimer.class.st
- package.st
- Association.extension.st
- BioEFetchCmd.class.st
- BioEFetchLit.class.st
- BioEFetchRetCmd.class.st
- BioEFetchSeq.class.st
- BioEFetchTax.class.st
- BioEGBSeqBasicReader.class.st
- BioEGlobalQuery.class.st
- BioEInfo.class.st
- BioELink.class.st
- BioELitDatabase.class.st
- BioEntrezBioSystems.class.st
- BioEntrezBooks.class.st
- BioEntrezCancerChromosomes.class.st
- BioEntrezClient.class.st
- BioEntrezCommand.class.st
- BioEntrezConservedDomains.class.st
- BioEntrezDatabase.class.st
- BioEntrezDBGap.class.st
- BioEntrezEST.class.st
- BioEntrezGDS.class.st
- BioEntrezGene.class.st
- BioEntrezGenome.class.st
- BioEntrezGenomeProject.class.st
- BioEntrezGenSat.class.st
- BioEntrezGEO.class.st
- BioEntrezGSS.class.st
- BioEntrezHomoloGene.class.st
- BioEntrezJournals.class.st
- BioEntrezMeSH.class.st
- BioEntrezNLMCatalog.class.st
- BioEntrezNuccore.class.st
- BioEntrezOMIA.class.st
- BioEntrezOMIM.class.st
- BioEntrezPCAssay.class.st
- BioEntrezPCCompound.class.st
- BioEntrezPCSubstance.class.st
- BioEntrezPeptidome.class.st
- BioEntrezPopSet.class.st
- BioEntrezProbe.class.st
- BioEntrezProtein.class.st
- BioEntrezProteinClusters.class.st
- BioEntrezPubMed.class.st
- BioEntrezPubMedCentral.class.st
- BioEntrezSample.class.st
- BioEntrezSDI.class.st
- BioEntrezSearchResultReader.class.st
- BioEntrezSNP.class.st
- BioEntrezSRA.class.st
- BioEntrezStructure.class.st
- BioEntrezTaxonomy.class.st
- BioEntrezUIDCollection.class.st
- BioEntrezUniGene.class.st
- BioEntrezUniSTS.class.st
- BioEntrezUrl.class.st
- BioEntrezWebSite.class.st
- BioEPost.class.st
- BioERetDatabase.class.st
- BioESearch.class.st
- BioESearchResult.class.st
- BioESeqCommonDb.class.st
- BioESeqDatabase.class.st
- BioESpell.class.st
- BioESSGSSDb.class.st
- BioESummary.class.st
- BioESummaryAlternative.class.st
- BioEWebEnvCmd.class.st
- BioEXmlGBSeqReader.class.st
- BioGBSeqCollection.class.st
- Date.extension.st
- Dictionary.extension.st
- Integer.extension.st
- Interval.extension.st
- ManifestBioEntrez.class.st
- package.st
- SequenceableCollection.extension.st
- BioEntrezClientTest.class.st
- BioEntrezParserTest.class.st
- BioEntrezReaderTest.class.st
- BioEntrezUIDCollectionTest.class.st
- BioEntrezUrlTest.class.st
- BioGBSeqCollectionTest.class.st
- package.st
- BioACEFile.class.st
- BioAlignment.extension.st
- BioBEDDetailFormatter.class.st
- BioBEDFormatter.class.st
- BioBEDGraphFormatter.class.st
- BioBigBEDFormatter.class.st
- BioBlastCSVFormatter.class.st
- BioContractionNaming.class.st
- BioCSVFile.class.st
- BioCSVFileCollection.class.st
- BioCSVFormatter.class.st
- BioEIGENSTRATWriter.class.st
- BioFASTAFile.class.st
- BioFASTAFileCollection.class.st
- BioFASTAFormatter.class.st
- BioFile.class.st
- BioFileFormat.class.st
- BioFileFormatter.class.st
- BioFlatGenBankFormatter.class.st
- BioFluxusRDFFormatter.class.st
- BioFormatter.class.st
- BioGBSeqCSVFormatter.class.st
- BioGenBankFile.class.st
- BioGoogleFusionTablesFormatter.class.st
- BioHaploViewFormatter.class.st
- BioMAPFormatter.class.st
- BioMatrixFormatter.class.st
- BioMEGAFormatter.class.st
- BioMEGASeqRecord.class.st
- BioNaming.class.st
- BioNewickFormatter.class.st
- BioNexusBlock.class.st
- BioPEDFormatter.class.st
- BioPHASECSVFormatter.class.st
- BioPhaseINPFile.class.st
- BioPhaseMAPFile.class.st
- BioPhylip.class.st
- BioPhylipFile.class.st
- BioRDFLegacyFormatter.class.st
- BioRehhLogPValueCollector.class.st
- BioRestrictionMapFormatter.class.st
- BioSequenceFeature.extension.st
- BioSequenceFeatureFormatter.class.st
- BioSequenceFormatter.class.st
- BioStandardNaming.class.st
- BioVCFFormatter.class.st
- BioVCFRecord.class.st
- BioVCFRecordSample.class.st
- BioVCFRecordWriter.class.st
- BioXMLFormatter.class.st
- Dictionary.extension.st
- Object.extension.st
- package.st
- PMVector.extension.st
- BioFASTAFormatterTest.class.st
- BioFileFormatTest.class.st
- BioFormatterTest.class.st
- BioMatrixFormatterTest.class.st
- BioMEGAFormatterTest.class.st
- BioNamingTest.class.st
- BioSequenceFormatterTest.class.st
- package.st
- BioHaplotype.class.st
- BioHaplotypeAdded.class.st
- BioHaplotypeAnnouncement.class.st
- BioHaplotypeBlock.class.st
- BioHaplotypeHapReader.class.st
- BioHaplotypeMatrix.class.st
- BioHaplotypePanel.class.st
- BioHaplotypePlinkReader.class.st
- BioHaplotypeRemoved.class.st
- BioHaplotypes.class.st
- BioHaplotypeVCFReader.class.st
- BioHaplotypeWriter.class.st
- BioHapVisualizationExamples.class.st
- BioPhasedGenotype.class.st
- BioVariant.class.st
- BioVariantRegistered.class.st
- package.st
- BioHaplotypeIOTest.class.st
- BioHaplotypeMatrixTest.class.st
- BioHaplotypePanelTest.class.st
- BioHaplotypesTest.class.st
- BioHaplotypeTest.class.st
- BioPhasedGenotypeTest.class.st
- BioVariantTest.class.st
- package.st
- BioHaplotypesTest.class.st
- package.st
- BioDNANucleotide.extension.st
- BioLAITWrapper.class.st
- BioLAMPLD2WayVisualizer.class.st
- BioLAMPLD3WayVisualizer.class.st
- BioLAMPLDFormatter.class.st
- BioLAMPLDGenotypeFormatter.class.st
- BioLAMPLDVisualizer.class.st
- BioLAMPLDWrapper.class.st
- BioSNPAncestry.class.st
- Fraction.extension.st
- Number.extension.st
- package.st
- String.extension.st
- BioBLASTDatabaseUpdater.class.st
- BioBTauAlt.class.st
- BioBTauGD.class.st
- BioBTauUMD.class.st
- BioGallusGallusGD.class.st
- BioHSapiensGD.class.st
- BioMMCelera.class.st
- BioMMusculusGD.class.st
- BioMMusculusGRCm.class.st
- BioNCBIALURepeats.class.st
- BioNCBIChrGD.class.st
- BioNCBIChromosome.class.st
- BioNCBICommand.class.st
- BioNCBICSCommand.class.st
- BioNCBIDatabase.class.st
- BioNCBIDBSTS.class.st
- BioNCBIDelete.class.st
- BioNCBIDownloader.class.st
- BioNCBIEnvNT.class.st
- BioNCBIEST.class.st
- BioNCBIESTOthers.class.st
- BioNCBIFetch.class.st
- BioNCBIGenBankResult.class.st
- BioNCBIGenomeDownloader.class.st
- BioNCBIGet.class.st
- BioNCBIGSS.class.st
- BioNCBIHTGS.class.st
- BioNCBIInfo.class.st
- BioNCBINucleotideCollection.class.st
- BioNCBIPat.class.st
- BioNCBIPDB.class.st
- BioNCBIPut.class.st
- BioNCBIRefSeqGenomic.class.st
- BioNCBIRefSeqRNA.class.st
- BioNCBIWeb.class.st
- BioNCBIWGS.class.st
- BionCoV2019GD.class.st
- package.st
- BioNCBIDatabaseTest.class.st
- package.st
- Association.extension.st
- BioCutadaptWrapper.class.st
- BioFASTQMcfWrapper.class.st
- BioIlluminaSNPObject.class.st
- BioIlluminaSNPReader.class.st
- BioMultiQCWrapper.class.st
- BioQualityEncoding.class.st
- Integer.extension.st
- package.st
- BioAnnotation.class.st
- BioOBOOntologyParser.class.st
- BioOntology.class.st
- BioOntologyNamespace.class.st
- BioOntologyParser.class.st
- BioOntologyRelationship.class.st
- BioOntologyTerm.class.st
- BioOWLOntologyParser.class.st
- package.st
- BioOntologyTest.class.st
- package.st
- BioOrthoDatabase.class.st
- BioOrthoDatabaseTest.class.st
- BioOrthoGene.class.st
- BioOrthoGeneTest.class.st
- BioOrthoGroup.class.st
- BioOrthoMembership.class.st
- BioOrthoMembershipTest.class.st
- BioOrthoScoreable.class.st
- BioOrthoScoreableTest.class.st
- BioOrthoScoreDefinition.class.st
- BioOrthoScoreDefinitionTest.class.st
- BioOrthoSpecies.class.st
- BioOrthoSpeciesTest.class.st
- package.st
- BioAbstractALParser.class.st
- BioAbstractParser.class.st
- BioAbstractTextParser.class.st
- BioAccessionParser.class.st
- BioAmbiguousBaseParser.class.st
- BioBEDBlock.class.st
- BioBEDFeature.class.st
- BioBEDParser.class.st
- BioBEDScanner.class.st
- BioBlastContainerNode.class.st
- BioBlastHitNode.class.st
- BioBlastHspNode.class.st
- BioBlastNode.class.st
- BioBlastParentNode.class.st
- BioBlastRootNode.class.st
- BioBlastStructureNode.class.st
- BioBlastValueNode.class.st
- BioBrookhavenProtParser.class.st
- BioCompositeIDParser.class.st
- BioDDBJParser.class.st
- BioEMBLParser.class.st
- BioEntrezResultParser.class.st
- BioEntrezXMLGBBasicParser.class.st
- BioEntrezXMLGBFullParser.class.st
- BioEntrezXMLGBSeqFeatureQualParser.class.st
- BioEntrezXMLGBSeqFullParser.class.st
- BioEntrezXMLGBSeqJournalParser.class.st
- BioEntrezXMLGBSeqParser.class.st
- BioEntrezXMLGenBankSeqParser.class.st
- BioEntrezXMLGenSetParser.class.st
- BioEResultKeysParser.class.st
- BioFASTABasicParser.class.st
- BioFASTAMultiParser.class.st
- BioFASTAParser.class.st
- BioFastaRecord.extension.st
- BioFASTQInterleavedParser.class.st
- BioFASTQPairedEndParser.class.st
- BioFASTQPairedEndRecord.class.st
- BioFASTQParser.class.st
- BioFASTQQA.class.st
- BioFASTQRecord.class.st
- BioFASTQSampler.class.st
- BioFlatGenBankParser.class.st
- BioGBParser.class.st
- BioGenBankAssociation.class.st
- BioGenBankRecord.class.st
- BioGenomicInterval.class.st
- BioGenomicIntervalCollection.class.st
- BioGFF3CommentRecordNode.class.st
- BioGFF3DirectiveListNode.class.st
- BioGFF3DirectiveNode.class.st
- BioGFF3Feature.class.st
- BioGFF3FeatureLineNode.class.st
- BioGFF3FeatureListNode.class.st
- BioGFF3File.class.st
- BioGFF3GFF3FileNode.class.st
- BioGFF3GFF3FileNodeVisitor.class.st
- BioGFF3Parser.class.st
- BioGFF3Scanner.class.st
- BioGIBackBoneIdParser.class.st
- BioGIParser.class.st
- BioIDParser.class.st
- BioLocalParser.class.st
- BioMAFDocumentNode.class.st
- BioMAFParser.class.st
- BioMAFRecord.class.st
- BioMAFRowNode.class.st
- BioMAFScanner.class.st
- BioMAFSmaCCParser.class.st
- BioMutation.class.st
- BioMutationSet.class.st
- BioNCBIBlastSAXParser.class.st
- BioNCBIBlastSAXTokenizer.class.st
- BioNCBIGenericIdParser.class.st
- BioNCBIIdParser.class.st
- BioNCBILocusParser.class.st
- BioNCBIXMLBlastParser.class.st
- BioParser.class.st
- BioPatentsParser.class.st
- BioPDBAtomRecord.class.st
- BioPDBConectRecord.class.st
- BioPDBFile.class.st
- BioPDBHeaderRecord.class.st
- BioPDBHelixRecord.class.st
- BioPDBModelRecord.class.st
- BioPDBRecord.class.st
- BioPDBRemarkRecord.class.st
- BioPDBScanner.class.st
- BioPDBSeqResRecord.class.st
- BioPDBSheetRecord.class.st
- BioPDBSmaCCParser.class.st
- BioPDBTitleRecord.class.st
- BioPhylipParser.class.st
- BioPhylipPetitParser.class.st
- BioPhylipScanner.class.st
- BioPhylipSmaCCParser.class.st
- BioPhylipTokenizerWrapper.class.st
- BioProtInfoParser.class.st
- BioProtResParser.class.st
- BioQBlastParser.class.st
- BioREBASEParser.class.st
- BioRefSeqParser.class.st
- BioSAMParser.class.st
- BioSAMRecord.class.st
- BioSAXParser.class.st
- BioSwissProtParser.class.st
- BioXMLDictionary.class.st
- BioXMLDictionaryMap.class.st
- BioXMLOrderedCollection.class.st
- BioXMLParser.class.st
- BioXMLResultFormatter.class.st
- Collection.extension.st
- Dictionary.extension.st
- Number.extension.st
- OrderedCollection.extension.st
- package.st
- PP2ActionNode.extension.st
- PP2NodeFactory.extension.st
- SequenceableCollection.extension.st
- String.extension.st
- TBioGFF3GFF3FileNodeVisitor.trait.st
- BioAbstractFASTAParserTest.class.st
- BioAbstractParserTest.class.st
- BioAccessionParserTest.class.st
- BioBEDTest.class.st
- BioCGCParserTest.class.st
- BioDegenerateBaseParserTest.class.st
- BioDNANucleotideParserTest.class.st
- BioDNASequenceParserTest.class.st
- BioEMBLParserTest.class.st
- BioEntrezXMLGenBankAccessionParserTest.class.st
- BioFASTAParserTest.class.st
- BioFASTQParserTest.class.st
- BioGenBankParserTest.class.st
- BioGenIdParserTest.class.st
- BioGFF3Test.class.st
- BioMAFParserTest.class.st
- BioMAFTest.class.st
- BioNCBIIdParserTest.class.st
- BioPairedEndParserTest.class.st
- BioPDBParserTest.class.st
- BioPhylipParserTest.class.st
- BioProteinParserTest.class.st
- BioSwissProtParserTest.class.st
- package.st
- BioCompartment.class.st
- BioComplex.class.st
- BioInteraction.class.st
- BioNetwork.class.st
- BioPathway.class.st
- BioPathwaySpecies.class.st
- package.st
- BioPathwayTest.class.st
- package.st
- BioBrowser.class.st
- BioClassicSystemBrowser.class.st
- BioClassificationInspector.class.st
- BioExplorer.class.st
- BioObject.extension.st
- BioSettings.class.st
- BioSmalltalkUpdater.class.st
- ChooseDropListDialogWindow.extension.st
- FileList.extension.st
- FileReference.extension.st
- Inspector.extension.st
- MacOSXPlatform.extension.st
- MorphicUIManager.extension.st
- ObjectExplorer.extension.st
- OrderedCollectionInspector.extension.st
- OrderPreservingDictionary.extension.st
- OSPlatform.extension.st
- package.st
- UnixPlatform.extension.st
- Win32Platform.extension.st
- BioBrowser.extension.st
- BioFileFormatTest.extension.st
- BioNCBIGenBankReaderTest.extension.st
- BioObject.extension.st
- DosFileDirectory.extension.st
- FileDirectory.extension.st
- MacFileDirectory.extension.st
- package.st
- SequenceableCollection.extension.st
- UnixFileDirectory.extension.st
- BioBrowser.extension.st
- BioFileFormatTest.extension.st
- BioNCBIGenBankReaderTest.extension.st
- BioObject.extension.st
- FileSystem.extension.st
- Inspector.extension.st
- package.st
- SequenceableCollection.extension.st
- ArchiveMember.extension.st
- BioBrowser.class.st
- BioClassicSystemBrowser.class.st
- BioObject.extension.st
- BioSettings.class.st
- ChooseDropListDialogWindow.extension.st
- Collection.extension.st
- FileList.extension.st
- FileReference.extension.st
- FileSystem.extension.st
- MacOSProcessAccessor.extension.st
- MacOSXPlatform.extension.st
- MorphicUIManager.extension.st
- NeoCSVReader.extension.st
- Object.extension.st
- ObjectExplorer.extension.st
- OrderPreservingDictionary.extension.st
- OSPlatform.extension.st
- package.st
- RPackage.extension.st
- SequenceableCollection.extension.st
- SettingTreeBuilder.extension.st
- UnixOSProcessAccessor.extension.st
- UnixPlatform.extension.st
- Win32Platform.extension.st
- WindowsOSProcessAccessor.extension.st
- ZipArchiveMember.extension.st
- BioChrSelector.class.st
- BioPanelSelector.class.st
- BioPEDMAPFilesLoader.class.st
- BioSettings.class.st
- BioSpcSelector.class.st
- BioTextHighlight.class.st
- MorphicUIManager.extension.st
- NeoCSVReader.extension.st
- Object.extension.st
- package.st
- PluggableTextMorph.extension.st
- TextHighlight.class.st
- BioObject.extension.st
- package.st
- ZipArchiveMember.extension.st
- ZnBufferedReadStream.extension.st
- ZnCharacterReadStream.extension.st
- ZnEncodedStream.extension.st
- ArchiveMember.extension.st
- BioObject.extension.st
- DateAndTime.extension.st
- FileSystem.extension.st
- MacOSXPlatform.extension.st
- package.st
- SequenceableCollection.extension.st
- SettingTreeBuilder.extension.st
- UnixPlatform.extension.st
- Win32Platform.extension.st
- BioNewickFile.class.st
- BioNewickScanner.class.st
- BioNewickSmaCCParser.class.st
- BioNeXMLParser.class.st
- BioNexusFile.class.st
- BioPhyloClade.class.st
- BioPhylogeneticsExamples.class.st
- BioPhyloNewickReader.class.st
- BioPhyloNewickWriter.class.st
- BioPhyloNexusReader.class.st
- BioPhyloPlotBuilder.class.st
- BioPhyloTree.class.st
- BioPhyloXMLParser.class.st
- BioRelation.class.st
- package.st
- BioPolymer.class.st
- package.st
- BioPolymerTest.class.st
- package.st
- BioInspector.class.st
- Object.extension.st
- package.st
- BioAlignment.extension.st
- BioDnaCircularGraphicRecord.class.st
- BioDnaFeature.class.st
- BioDnaFeatureLevelComputer.class.st
- BioDnaFeaturesViewerExamples.class.st
- BioDnaGraphicRecord.class.st
- BioFastaMultiRecord.extension.st
- BioFastaRecord.extension.st
- BioRSBaseBuilder.class.st
- BioSequence.extension.st
- package.st
- String.extension.st
- BioDnaFeaturesViewerTest.class.st
- package.st
- BioBreed.class.st
- BioNamedBreed.class.st
- BioNullBreed.class.st
- BioPopImporter.class.st
- BioPopRepository.class.st
- BioPopRepositoryVersion.class.st
- BioPopulation.class.st
- BioSpecies.class.st
- BioSpeciesLists.class.st
- package.st
- String.extension.st
- BioSpeciesListsTest.class.st
- package.st
- BioBreedTest.class.st
- package.st
- BioJob.class.st
- BioProject.class.st
- BioUser.class.st
- package.st
- BioPFTestApp.class.st
- BioProjectTests.class.st
- BioUserTests.class.st
- package.st
- BioinformaticsCA.class.st
- BioSoftwareCatalog.class.st
- BioSoftwareItem.class.st
- package.st
- BioObject.extension.st
- BioSAXParser.extension.st
- FSFilesystem.extension.st
- FSReference.extension.st
- MacOSProcessAccessor.extension.st
- OSProcessAccessor.extension.st
- package.st
- SequenceableCollection.extension.st
- String.extension.st
- UnixOSProcessAccessor.extension.st
- WindowsOSProcessAccessor.extension.st
- BioRangedSummarizedExperiment.class.st
- BioSummarizedExperiment.class.st
- package.st
- BioRangedSummarizedExperimentTest.class.st
- BioSummarizedExperimentTest.class.st
- package.st
- BioGenomeDiagram.class.st
- BioMaterial.class.st
- BioSample.class.st
- BioSampleCollection.class.st
- BioSequenceStream.class.st
- Collection.extension.st
- Dictionary.extension.st
- FTPClient.extension.st
- package.st
- BioTolGroupSearchCommand.class.st
- BioTolTreeStructureCommand.class.st
- BioTolWebClient.class.st
- BioTolWebCommand.class.st
- package.st
- Association.extension.st
- Bag.extension.st
- Behavior.extension.st
- BioAbstractAdapter.class.st
- BioAccession.class.st
- BioAlignment.class.st
- BioAlphabet.class.st
- BioBasicReader.class.st
- BioCatalysis.class.st
- BioCDSPosition.class.st
- BioChromosome.class.st
- BioChromosomeFragment.class.st
- BioCircularSequence.class.st
- BioCodonTable.class.st
- BioCodonTables.class.st
- BioCommandObject.class.st
- BioComplementaryAlphabet.class.st
- BioConnectionSettings.class.st
- BioConsensusStrategy.class.st
- BioDBObject.class.st
- BioDFSNode.class.st
- BioDNAAlphabet.class.st
- BioDNACodonTables.class.st
- BioDNANucleotide.class.st
- BioDownloader.trait.st
- BioDummyConsensusStrategy.class.st
- BioDuplicatedObject.class.st
- BioEmptyResultObject.class.st
- BioEntrezXmlReader.class.st
- BioEnzyme.class.st
- BioErrorSpecificationObject.class.st
- BioException.class.st
- BioExecutionEngine.class.st
- BioExon.class.st
- BioFAO_STRPanel.class.st
- BioFastaMultiRecord.class.st
- BioFastaRecord.class.st
- BioFileCollection.class.st
- BioFilter.class.st
- BioFilteredReader.class.st
- BioFilteredResult.class.st
- BioFLSerializer.class.st
- BioFTPDownloader.trait.st
- BioGene.class.st
- BioGenome.class.st
- BioGenomicRange.class.st
- BioGenomicRanges.class.st
- BioGenotype.class.st
- BioGenotypeCollection.class.st
- BioGroupedCollection.class.st
- BioGtUnixSubprocess.class.st
- BioHirschberg.class.st
- BioHTTPClient.class.st
- BioInitialResult.class.st
- BioINSDCCollection.class.st
- BioInteractorEngine.class.st
- BioIRanges.class.st
- BioISAG_STRPanel.class.st
- BioIUPACAlphabet.class.st
- BioIUPACAmbiguousDNA.class.st
- BioIUPACAmbiguousRNA.class.st
- BioIUPACDNA.class.st
- BioIUPACDNAExtended.class.st
- BioIUPACProtein.class.st
- BioIUPACProteinExtended.class.st
- BioIUPACRNA.class.st
- BioIUPACUnambiguousDNA.class.st
- BioIUPACUnambiguousRNA.class.st
- BioKomServer.class.st
- BioLocus.class.st
- BioMaObjectSerializer.class.st
- BioMinisatelliteSequence.class.st
- BioMutableSeq.class.st
- BioNamedObject.class.st
- BioNCBIUrl2.class.st
- BioNotFoundObject.class.st
- BioNullAlphabet.class.st
- BioObject.class.st
- BioOrderedCollection.class.st
- BioORF.class.st
- BioOSInterfaceEngine.class.st
- BioOSPlatformEngine.class.st
- BioOSProcessEngine.class.st
- BioOSProcessExecutor.class.st
- BioOSSubProcessExecutor.class.st
- BioPanel.class.st
- BioProcessWrapperExecutor.class.st
- BioPropertyObject.class.st
- BioProtein.class.st
- BioProteinPosition.class.st
- BioReaction.class.st
- BioReader.class.st
- BioReadersCollection.class.st
- BioReducedAlphabet.class.st
- BioReducedAlphabetRegistry.class.st
- BioRemoteCommandObject.class.st
- BioRepeatSequence.class.st
- BioRestriction.class.st
- BioRestrictionEnzyme.class.st
- BioResultObject.class.st
- BioRNACodonTables.class.st
- BioSatelliteSequence.class.st
- BioSeqAnnotation.class.st
- BioSeqCoordinatesMapper.class.st
- BioSeqQuality.class.st
- BioSeqRecord.class.st
- BioSequence.class.st
- BioSequenceFeature.class.st
- BioSerializationEngine.class.st
- BioSIXXSerializer.class.st
- BioSmartRefStreamSerializer.class.st
- BioStrand.class.st
- BioSTRSequence.class.st
- BioSubstitutionMatrix.class.st
- BioTranscript.class.st
- BioUIManagerEngine.class.st
- BioUnknownSeq.class.st
- BioUrl.class.st
- BioVersionedObject.class.st
- BioWebClient.class.st
- BioWebClientEngine.class.st
- BioWebCollection.class.st
- BioWebResult.class.st
- BioWebServerEngine.class.st
- BioZnHttpClient.class.st
- BioZnHTTPServer.class.st
- Character.extension.st
- CharacterSet.extension.st
- Collection.extension.st
- Dictionary.extension.st
- FileReference.extension.st
- FileSystemDirectoryEntry.extension.st
- Integer.extension.st
- Interval.extension.st
- Magnitude.extension.st
- Object.extension.st
- OrderedCollection.extension.st
- package.st
- SequenceableCollection.extension.st
- String.extension.st
- WriteStream.extension.st
- ZnEncodedStream.extension.st
- BioAbstractSequenceTest.class.st
- BioAbstractTest.class.st
- BioAccessionTest.class.st
- BioAdapterTest.class.st
- BioAlignmentTest.class.st
- BioAlphabetTest.class.st
- BioCodonTableTest.class.st
- BioCollectionTest.class.st
- BioFastaMultiRecordTest.class.st
- BioGenomeTest.class.st
- BioGenomicRangesTest.class.st
- BioGtUnixSubprocessTest.class.st
- BioHirschbergTest.class.st
- BioISAGPanelTest.class.st
- BioLocusTest.class.st
- BioMutableSeqTest.class.st
- BioNamedObjectTest.class.st
- BioORFTest.class.st
- BioOSSubProcessExecutorTest.class.st
- BioPositionTest.class.st
- BioReducedAlphabetTest.class.st
- BioRepeatSequenceTest.class.st
- BioRestrictionTest.class.st
- BioSeqCoordinatesMapperTest.class.st
- BioSeqRecordTest.class.st
- BioSequenceAnalysisTest.class.st
- BioSequenceStringTest.class.st
- BioSequenceTest.class.st
- BioStringTest.class.st
- BioUnknownSeqTest.class.st
- CharacterTest.extension.st
- package.st
- StringTest.extension.st
- BioClustalXSamples.class.st
- BioESamples.class.st
- BioFASTASamples.class.st
- BioFASTQSamples.class.st
- BioSamples.class.st
- package.st
- BioACANAWrapper.class.st
- BioAGAWrapper.class.st
- BioBayAreaWrapper.class.st
- BioClustalOWrapper.class.st
- BioClustalWWrapper.class.st
- BioCSBLASTWrapper.class.st
- BioEMBOSSCpgplotWrapper.class.st
- BioEMBOSSDotmatcherWrapper.class.st
- BioEMBOSSDotpathWrapper.class.st
- BioEMBOSSDottupWrapper.class.st
- BioEMBOSSIsochoreWrapper.class.st
- BioEMBOSSNewcpgreportWrapper.class.st
- BioEMBOSSPepinfoWrapper.class.st
- BioEMBOSSPepstatsWrapper.class.st
- BioEMBOSSPepwindowWrapper.class.st
- BioEMBOSSPolydotWrapper.class.st
- BioEMBOSSSeqCksumWrapper.class.st
- BioEMBOSSSeqretWrapper.class.st
- BioFASTAWrapper.class.st
- BioGbk2FasWrapper.class.st
- BioGenePopWrapper.class.st
- BioHHSearchWrapper.class.st
- BioHMMERWrapper.class.st
- BioInfernalWrapper.class.st
- BioInterProScanWrapper.class.st
- BioKAlignWrapper.class.st
- BioLocalWrapper.class.st
- BioMAFFTWrapper.class.st
- BioMUSCLE5Wrapper.class.st
- BioMUSCLEWrapper.class.st
- BioPfamScanWrapper.class.st
- BioPhobiusWrapper.class.st
- BioPLINK1Wrapper.class.st
- BioPLINK2Wrapper.class.st
- BioPLINKWrapper.class.st
- BioPrattWrapper.class.st
- BioPritchardStructureWrapper.class.st
- BioRADARWrapper.class.st
- BioSAMWrapper.class.st
- BioSAPSWrapper.class.st
- BioShapeIt2Wrapper.class.st
- BioShapeIt2WrapperR644.class.st
- BioShapeIt2WrapperR727.class.st
- BioSimplePhylogenyWrapper.class.st
- BioTCoffeeWrapper.class.st
- BioWebWrapper.class.st
- BioWrapperObject.class.st
- Character.extension.st
- Integer.extension.st
- Interval.extension.st
- package.st
- SequenceableCollection.extension.st
- BioACANAWrapperTest.class.st
- BioAGAWrapperTest.class.st
- BioBayAreaWrapperTest.class.st
- BioClustalOWrapperTest.class.st
- BioClustalWWrapperTest.class.st
- BioCSBLASTWrapperTest.class.st
- BioCutadaptWrapperTest.class.st
- BioEMBOSSCpgplotWrapperTest.class.st
- BioEMBOSSDotmatcherWrapperTest.class.st
- BioEMBOSSDotpathWrapperTest.class.st
- BioEMBOSSDottupWrapperTest.class.st
- BioEMBOSSIsochoreWrapperTest.class.st
- BioEMBOSSNewcpgreportWrapperTest.class.st
- BioEMBOSSPepinfoWrapperTest.class.st
- BioEMBOSSPepstatsWrapperTest.class.st
- BioEMBOSSPepwindowWrapperTest.class.st
- BioEMBOSSPolydotWrapperTest.class.st
- BioEMBOSSSeqCksumWrapperTest.class.st
- BioEMBOSSSeqretWrapperTest.class.st
- BioFASTAWrapperTest.class.st
- BioFASTQSamplesTest.class.st
- BioGbk2FasWrapperTest.class.st
- BioGenePopWrapperTest.class.st
- BioHHSearchWrapperTest.class.st
- BioHMMERWrapperTest.class.st
- BioInfernalWrapperTest.class.st
- BioInterProScanWrapperTest.class.st
- BioKAlignWrapperTest.class.st
- BioMAFFTWrapperTest.class.st
- BioMultiQCWrapperTest.class.st
- BioMUSCLE5WrapperTest.class.st
- BioMUSCLEWrapperTest.class.st
- BioPfamScanWrapperTest.class.st
- BioPhobiusWrapperTest.class.st
- BioPLINK1WrapperTest.class.st
- BioPLINK2WrapperTest.class.st
- BioPrattWrapperTest.class.st
- BioPritchardStructureWrapperTest.class.st
- BioRADARWrapperTest.class.st
- BioSAMWrapperTest.class.st
- BioSAPSWrapperTest.class.st
- BioShapeIt2WrapperR644Test.class.st
- BioShapeIt2WrapperR727Test.class.st
- BioShapeIt2WrapperTest.class.st
- BioSimplePhylogenyWrapperTest.class.st
- BioTCoffeeWrapperTest.class.st
- package.st
- Accumulator.class.st
- AccumulatorTest.class.st
- ArrayMatrix.class.st
- ArrayMatrixTest.class.st
- ArrayVector.class.st
- ArrayVectorTest.class.st
- BooleanVector.class.st
- BooleanVectorTest.class.st
- ClusterEngine.class.st
- ClusterEngineTest.class.st
- ClusteringData.class.st
- ClusteringVector.class.st
- Collection.extension.st
- CollectionItem.class.st
- ColumnMatrix.class.st
- ColumnMatrixTest.class.st
- CorrelationSquare.class.st
- CorrelationVector.class.st
- Dendrogram.class.st
- DendrogramLeaf.class.st
- DendrogramNode.class.st
- DendrogramTest.class.st
- DiagonalMatrix.class.st
- DistanceSquare.class.st
- FeatureCollection.class.st
- FUMatrix.class.st
- IncrementNotification.class.st
- Integer.extension.st
- MappedMatrix.class.st
- MappedVector.class.st
- Mapping.class.st
- MatrixCoercion.class.st
- MatrixCoercionTest.class.st
- MatrixDecorator.class.st
- MatrixPath.class.st
- MatrixTest.class.st
- MatrixView.class.st
- NameMapping.class.st
- NameMappingTest.class.st
- Number.extension.st
- NumberMapping.class.st
- Object.extension.st
- package.st
- Point.extension.st
- RowMatrix.class.st
- RowMatrixTest.class.st
- SequenceableCollection.extension.st
- SequenceableCollectionSorter.class.st
- SeriationEngine.class.st
- SmartMapping.class.st
- SparseColumnMatrix.class.st
- SparseColumnMatrixTest.class.st
- SparseRowMatrix.class.st
- SparseVector.class.st
- SparseVectorTest.class.st
- SubscriptOutOfBoundsError.class.st
- Symbol.extension.st
- SymetricMatrix.class.st
- TimeWarpingEngine.class.st
- UnboundedMatrix.class.st
- ValueItem.class.st
- Vector.class.st
- VectorCoercion.class.st
- VectorDecorator.class.st
- VectorItem.class.st
- VectorTest.class.st
- ConfigurationOfBioSmalltalk.class.st
- package.st
- DhbMatrix.extension.st
- package.st
- FileBasedGraphVizGenerator.class.st
- GraphViz.class.st
- GraphVizAttributableItem.class.st
- GraphVizAttribute.class.st
- GraphVizBaseTests.class.st
- GraphVizCostume.class.st
- GraphVizEdge.class.st
- GraphVizGenerator.class.st
- GraphVizGraph.class.st
- GraphVizGraphingTests.class.st
- GraphVizGraphModelTests.class.st
- GraphVizItem.class.st
- GraphVizLayoutTests.class.st
- GraphVizNode.class.st
- GraphVizOSProcessGeneratorTests.class.st
- GraphVizStyle.class.st
- GraphVizSubgraph.class.st
- GraphVizWin32GeneratorTests.class.st
- MacOSGraphVizGenerator.class.st
- OSProcessGraphVizGenerator.class.st
- package.st
- SystemOrganizer.extension.st
- Win32GraphVizGenerator.class.st
- AbstractStemmer.class.st
- BidirectionalMap.class.st
- BidirectionalMapTest.class.st
- BinaryTermFrequency.class.st
- CamelcaseScanner.class.st
- CamelcaseScannerTest.class.st
- Collection.extension.st
- Corpus.class.st
- CorpusTest.class.st
- Entropy.class.st
- GermanStemmer.class.st
- GlobalFrequencyInverseDocumentFrequency.class.st
- GlobalWeighting.class.st
- HXEnglishCorpus.class.st
- HXSpanishCorpus.class.st
- InverseDocumentFrequency.class.st
- LatentSemanticAnalysis.class.st
- LocalWeighting.class.st
- LogTermFrequency.class.st
- NullGlobalWeighting.class.st
- NullStemmer.class.st
- package.st
- PartitionCorrelationSquare.class.st
- PorterStemmer.class.st
- PorterStemmerTest.class.st
- PositionableStream.extension.st
- RealEntropy.class.st
- SequenceableCollection.extension.st
- SingularValueDecomposition.class.st
- SingularValueDecompositionTest.class.st
- Stemmer.class.st
- Stopwords.class.st
- StopwordsTest.class.st
- Stream.extension.st
- String.extension.st
- SVDAlgorithm.class.st
- SVDProcess.class.st
- TermDocumentMatrix.class.st
- TermDocumentMatrixTest.class.st
- TermFrequency.class.st
- Terms.class.st
- TermScanner.class.st
- TermScannerTest.class.st
- TermsTest.class.st
- TestCase.extension.st
- Topic.class.st
- UnitVector.class.st
- Weighting.class.st
- .properties
- BioSmalltalkResourceFiles.tar.gz
- BioSmalltalkResourceFiles.zip
- .project
- .smalltalk.ston
- .travis.yml
- LICENSE
- README.md
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