KomaMRI.jl
Koma is a GPU-accelerated, Pulseq-compatible framework for simulating Magnetic Resonance Imaging (MRI) acquisitions. The primary focus of this package is to simulate the wide range of scenarios encountered during pulse sequence development.
파일 탐색기
- environment.yml
- Project.toml
- pipeline-julia.yml
- pipeline.yml
- runbenchmarks.yml
- runtests.yml
- bug.yaml
- feature_request.yaml
- Benchmark.yml
- CI.yml
- CIPreRelease.yml
- docs-preview-cleanup.yml
- docs-preview.yml
- FormatCheck.yml
- JuliaTagBot.yml
- pulseq-matlab-parity.yml
- codecov.yml
- CODEOWNERS
- dependabot.yml
- app-icon.png
- app-icon.svg
- GUI.svg
- home-image.svg
- logo-dark.svg
- logo.svg
- koma_seqgen.jl
- matlab_seqgen.m
- pypulseq_seqgen.py
- README.md
- run_suite.jl
- aggregate.jl
- Project.toml
- runbenchmarks.jl
- setup.jl
- docstrings.css
- index.ts
- style.css
- config.mts
- julia-repl-transformer.ts
- add-branch.png
- add-remote.png
- block-equation-intuition.svg
- create-branch-step1.png
- create-branch-step2.png
- create-fork-step1.png
- create-fork-step2.png
- create-pull-request.png
- create-remote-step1.png
- create-remote-step2.png
- dataflow.svg
- event-shapes-adc.svg
- event-shapes-gr-horizontal.svg
- event-shapes-gr.svg
- event-shapes-rf-horizontal.svg
- event-shapes-rf-zoh.svg
- event-shapes-rf.svg
- event-shapes.svg
- fill-pull-request.png
- gui-dashboard.png
- gui-export-to-mat.png
- gui-image-view.png
- gui-phantom-load.png
- gui-phantom-view.png
- gui-rawsignal-view.png
- gui-recon-params-view.png
- gui-scanner-view.png
- gui-seq-kspace-load.png
- gui-seq-kspace-view.png
- gui-seq-time-load.png
- gui-seq-time-view.png
- gui-sim-params-view.png
- head-rotation-axis.svg
- how-to-commit.png
- jupyter-create-new-notebook.png
- jupyter-empty-notebook.png
- jupyter-test-notebook.png
- jupyter-webio-problem.png
- koma-schema-dark.svg
- koma-schema-subdirs.svg
- koma-schema.svg
- koma-solution.png
- koma-solution.svg
- KomamultiGPU.svg
- KomamultiNode.svg
- KomamultiNodeCPU.svg
- magnus-convergence.png
- magnus-effective-field.png
- magnus-methods.svg
- open-folder.png
- periodic.svg
- ph-actions.svg
- ph-file-format.svg
- ph-spins.svg
- ph-timecurve.svg
- pluto-dashboard.png
- pluto-empty-notebook.png
- repl-scripts.png
- sequence-diagram.svg
- test-komamribase.png
- test-komamricore.png
- time-curve-1.svg
- time-curve-2.svg
- time-curve-3.svg
- time-curve-4.svg
- time-range.svg
- ui-export-data.gif
- ui-mainpage.png
- ui-observables.gif
- ui-seq.gif
- ui-simulation.gif
- ui-view-abs-image.png
- ui-view-raw-data.png
- AuthorBadge.vue
- Authors.vue
- stargazers.data.ts
- StarUs.vue
- VersionPicker.vue
- 3-phantom-format.md
- 4-sequence.md
- 5-seq-events.md
- 6-pulseq-event-mapping.md
- 7-simulation.md
- 9-gpu-explanation.md
- lit-1-phantom.jl
- lit-2-motion.jl
- lit-8-magnus-methods.jl
- 1-1-use-koma-ui.md
- 1-2-use-koma-notebooks.md
- 1-3-use-koma-scripts.md
- 1-4-use-koma-cli.md
- 2-create-your-own-phantom.md
- 3-create-your-own-sequence.md
- 4-run-distributed-simulations.md
- 5-contribute-to-koma.md
- pulseq-matlab-to-koma.md
- 1-getting-started.md
- center-images.css
- create-your-own-phantom-class-map.html
- create-your-own-phantom-flow-T1.html
- create-your-own-phantom-pelvis-T1.html
- create-your-own-sequence-kspace.html
- create-your-own-sequence-time.html
- event-adc.html
- event-combination.html
- event-gr-time-shaped-waveform.html
- event-gr-trapezoidal-waveform.html
- event-gr-uniformly-sampled-waveform.html
- event-rf-pulse-waveform.html
- event-rf-time-shaped-waveform.html
- event-rf-uniformly-sampled-waveform.html
- hide-documenter-example-output.css
- image-default-brain.html
- kspace-epi.html
- phantom-rho.html
- phantom-T2-circle.html
- plot-seq-epi.html
- pluto-fid-example.html
- raw-epi-brain-default.html
- seq-concatenation.html
- seq-epi-example-full.html
- seq-epi-example-some-blocks.html
- seq-spiral-pulseq-kspace.html
- seq-spiral-pulseq-seq-kspace.html
- seq-spiral-pulseq-time.html
- sim-bloch-seq.html
- sim-bloch-sig.html
- sim-blochdict-sig.html
- favicon.ico
- logo-dark.svg
- logo.svg
- 1-api.md
- 2-koma-base.md
- 3-koma-core.md
- 4-koma-files.md
- 5-koma-plots.md
- 6-koma-mri.md
- README.md
- README.md
- index.md
- .gitignore
- EmbedPlotlyBaseLiterate.jl
- index.html
- make.jl
- package.json
- Project.toml
- utils.jl
- CreateEPI.m
- CreateGradientEcho.m
- CreateRadial.m
- CreateSelectiveRF.m
- CreateSpinEchoEPI.m
- CreateSpiral.m
- epi_JEMRIS.seq
- epi_multislice.seq
- epi_ramp.seq
- epi_ramp_fatsat.seq
- epi_se.seq
- ge.seq
- gre_JEMRIS.seq
- radial_JEMRIS.seq
- spiral.seq
- brain.h5
- brain_motion.phantom
- brain_susceptibility.h5
- column1d.h5
- contracting_ring.phantom
- motion_jemris.dat
- shepplogan.h5
- sphere_chemical_shift.h5
- DiffPrepMCMRF.jl
- lit-01-FreeInductionDecay.jl
- lit-02-SmallTipAngleApproximation.jl
- lit-03-ChemicalShiftEPI.jl
- lit-04-3DSliceSelectiveAcquisition.jl
- lit-05-AdiabaticRFPulse.jl
- lit-06-PatientMotion.jl
- lit-07-DiffusionSignalAttenuation.jl
- lit-08-CartesianLabels.jl
- lit-09-TriggeredCardiacBSSFP.jl
- lit-10-PulseqGradientEcho.jl
- pluto-01-gradient-echo-spin-echo.jl
- pluto-02-low-field-cmra-optimization.jl
- pluto-03-low-field-boost-optimization.jl
- run_both.sh
- run_jemris.xml
- run_koma.jl
- signal_koma.mat
- signals.h5
- run_both.sh
- run_jemris.xml
- run_koma.jl
- signal_koma.mat
- signals.h5
- run_both.sh
- run_jemris.xml
- run_koma.jl
- signal_koma.mat
- signals.h5
- run_both.sh
- run_jemris.xml
- run_koma.jl
- signal_koma.mat
- signals.h5
- run_both.sh
- run_jemris.xml
- run_koma.jl
- signal_koma.mat
- signals.h5
- epi_100x100_TE100_FOV230.seq
- epi_100x100_TE100_FOV230.xml
- spiral_100x100_FOV230_SPZ_INTER1.seq
- spiral_100x100_FOV230_SPZ_INTER1.xml
- calculate_simulation_error.m
- out_gtx1650ti
- out_rtx2080ti
- README
- run_all_examples.sh
- seq.h5
- tmp.mat
- brain_mrilab.mat
- FRange.mat
- Koma_rtx2080ti_gtx1650ti
- MRiLab_rtx2080ti_gtx1650ti
- MRiLab_speed.jl
- README
- run_test.sh
- spiral_multishot_jemris.xml
- mrf.seqk
- MRF_signal_Δθ_23_NTRs_500.mrd
- MRFinput.mat
- MRFsimulation.jl
- Form_Part_I.pdf
- Form_Part_II.pdf
- Manifest.toml
- 0_fig_sinc.jl
- 0_acc_bench.jl
- 1_run_convergence.jl
- 1_run_cuda.jl
- 1_run_metal.jl
- 2_fig_acc.jl
- 2_fig_convergence_all_methods.jl
- Project.toml
- README.md
- KomaMRIBaseUnitfulExt.jl
- brain2D.mat
- brain3D.mat
- pelvis2D.mat
- AdcLabels.jl
- LabelInc.jl
- LabelSet.jl
- QuaternionRot.jl
- Trigger.jl
- ADC.jl
- AddBlockMacro.jl
- DelayDuration.jl
- DiscreteSequence.jl
- DiscreteSequenceQuantities.jl
- EXT.jl
- Grad.jl
- HardwareChecks.jl
- RF.jl
- RotationExtensions.jl
- SequenceEventWaveforms.jl
- TimingChecks.jl
- Phantom.jl
- Scanner.jl
- Sequence.jl
- MaxStepSizeRule.jl
- SamplingRule.jl
- SamplingGrid.jl
- SequenceBlockSampling.jl
- SequenceSampling.jl
- WaveformInterpolation.jl
- FlowPath.jl
- Path.jl
- HeartBeat.jl
- Rotate.jl
- Translate.jl
- ArbitraryAction.jl
- SimpleAction.jl
- Action.jl
- Interpolation.jl
- Motion.jl
- MotionList.jl
- NoMotion.jl
- SpinSpan.jl
- TimeCurve.jl
- EventCalculations.jl
- IndexPartitioning.jl
- TrapezoidalIntegration.jl
- CardiacSignal.jl
- NoPhysioSignal.jl
- PhysioSignal.jl
- deprecated.jl
- make_adc.jl
- make_adiabatic_pulse.jl
- make_arbitrary_grad.jl
- make_arbitrary_rf.jl
- make_block_pulse.jl
- make_delay.jl
- make_digital_output_pulse.jl
- make_extended_trapezoid.jl
- make_extended_trapezoid_area.jl
- make_gauss_pulse.jl
- make_label.jl
- make_rotation.jl
- make_sinc_pulse.jl
- make_slr_pulse.jl
- make_trapezoid.jl
- make_trigger.jl
- PulseDesigner.jl
- KomaMRIBase.jl
- precompile.jl
- Project.toml
- runtests.jl
- LICENSE
- Project.toml
- README.md
- KomaAMDGPUExt.jl
- KomaCUDAExt.jl
- KomaMetalExt.jl
- KomaoneAPIExt.jl
- Callback.jl
- progress_callback.jl
- Spinor.jl
- DiffusionModel.jl
- ISMRMRD.jl
- BlochCPU.jl
- BlochGPU.jl
- ExcitationKernel.jl
- KernelFunctions.jl
- PrecessionKernel.jl
- BlochDict.jl
- Common.jl
- MagnusBGLPrealloc.jl
- MagnusConstPrealloc.jl
- MagnusGLPrealloc.jl
- MagnusLinPrealloc.jl
- MagnusMidPrealloc.jl
- MagnusQuadPrealloc.jl
- BlochMagnusCPU.jl
- MagnusBGLCPU.jl
- MagnusGLCPU.jl
- MagnusMidCPU.jl
- MagnusQuadCPU.jl
- MagnusBGLKernel.jl
- MagnusGLKernel.jl
- MagnusMidKernel.jl
- MagnusQuadKernel.jl
- MagnusBGL4.jl
- MagnusBGL6.jl
- MagnusConst1.jl
- MagnusGL2.jl
- MagnusGL4.jl
- MagnusLin2.jl
- MagnusLinComm2.jl
- MagnusMid2.jl
- MagnusQuad2.jl
- MagnusQuad4.jl
- IntegrationNodeSampling.jl
- BlochMagnus.jl
- IntegrationNodes.jl
- BlochSimple.jl
- Magnetization.jl
- SimulationMethod.jl
- Flow.jl
- Functors.jl
- GPUFunctions.jl
- SimulatorCore.jl
- KomaMRICore.jl
- precompile.jl
- jemris_signals_epi_brain_motion.h5
- jemris_signals_epi_sphere_cs.h5
- phantom_sphere.h5
- utils.jl
- initialize_backend.jl
- Project.toml
- runtests.jl
- LICENSE
- Project.toml
- README.md
- JEMRIS.jl
- MRiLab.jl
- Phantom.jl
- PulseqEvents.jl
- ReadPulseq.jl
- Signature.jl
- WritePulseq.jl
- Pulseq.jl
- KomaMRIFiles.jl
- precompile.jl
- pyproject.toml
- uv.lock
- brain_mrilab.mat
- column1d.h5
- FRange.mat
- epi_JEMRIS.seq
- radial_JEMRIS.seq
- epi.seq
- label_test.py
- label_test.seq
- spiral.seq
- gre_rad.seq
- rotation_radial_tiny.seq
- unknown_ext.seq
- epi_JEMRIS.mat
- epi_JEMRIS.seq
- fid.mat
- fid.seq
- epi.mat
- epi.seq
- fid.mat
- fid.seq
- gre.mat
- gre.seq
- gre_lbl.mat
- gre_lbl.seq
- spiral.mat
- spiral.seq
- epi.mat
- epi.seq
- fid-gammaSTAR.mat
- fid-gammaSTAR.seq
- fid.mat
- fid.seq
- gr-time-shaped.mat
- gr-time-shaped.seq
- gr-trapezoidal.mat
- gr-trapezoidal.seq
- gr-uniformly-shaped.mat
- gr-uniformly-shaped.seq
- gre.mat
- gre.seq
- rf-pulse.mat
- rf-pulse.seq
- rf-time-shaped.mat
- rf-time-shaped.seq
- rf-uniformly-shaped.mat
- rf-uniformly-shaped.seq
- spiral.mat
- spiral.seq
- epi.mat
- epi.seq
- fid.mat
- fid.seq
- gr-time-shaped.mat
- gr-time-shaped.seq
- gr-trapezoidal.mat
- gr-trapezoidal.seq
- gr-uniformly-shaped.mat
- gr-uniformly-shaped.seq
- gre.mat
- gre.seq
- rf-pulse.mat
- rf-pulse.seq
- rf-time-shaped.mat
- rf-time-shaped.seq
- rf-uniformly-shaped.mat
- rf-uniformly-shaped.seq
- spiral.mat
- spiral.seq
- Project.toml
- pulseq_matlab_parity.jl
- runtests.jl
- utils.jl
- write_pulseq_matlab_parity_sequences.m
- LICENSE
- Project.toml
- T1cm.mat
- T2cm.mat
- DisplayFunctions.jl
- KomaMRIPlots.jl
- Koma_signal.mrd
- GUI_PlotlyBase_backend_test.jl
- Project.toml
- runtests.jl
- LICENSE
- Project.toml
- README.md
- ui_progress_callback.jl
- Recon.jl
- bootstrap-icons.woff
- bootstrap-icons.woff2
- icomoon.eot
- icomoon.svg
- icomoon.ttf
- icomoon.woff
- KaTeX_AMS-Regular.ttf
- KaTeX_AMS-Regular.woff
- KaTeX_AMS-Regular.woff2
- KaTeX_Caligraphic-Bold.ttf
- KaTeX_Caligraphic-Bold.woff
- KaTeX_Caligraphic-Bold.woff2
- KaTeX_Caligraphic-Regular.ttf
- KaTeX_Caligraphic-Regular.woff
- KaTeX_Caligraphic-Regular.woff2
- KaTeX_Fraktur-Bold.ttf
- KaTeX_Fraktur-Bold.woff
- KaTeX_Fraktur-Bold.woff2
- KaTeX_Fraktur-Regular.ttf
- KaTeX_Fraktur-Regular.woff
- KaTeX_Fraktur-Regular.woff2
- KaTeX_Main-Bold.ttf
- KaTeX_Main-Bold.woff
- KaTeX_Main-Bold.woff2
- KaTeX_Main-BoldItalic.ttf
- KaTeX_Main-BoldItalic.woff
- KaTeX_Main-BoldItalic.woff2
- KaTeX_Main-Italic.ttf
- KaTeX_Main-Italic.woff
- KaTeX_Main-Italic.woff2
- KaTeX_Main-Regular.ttf
- KaTeX_Main-Regular.woff
- KaTeX_Main-Regular.woff2
- KaTeX_Math-BoldItalic.ttf
- KaTeX_Math-BoldItalic.woff
- KaTeX_Math-BoldItalic.woff2
- KaTeX_Math-Italic.ttf
- KaTeX_Math-Italic.woff
- KaTeX_Math-Italic.woff2
- KaTeX_SansSerif-Bold.ttf
- KaTeX_SansSerif-Bold.woff
- KaTeX_SansSerif-Bold.woff2
- KaTeX_SansSerif-Italic.ttf
- KaTeX_SansSerif-Italic.woff
- KaTeX_SansSerif-Italic.woff2
- KaTeX_SansSerif-Regular.ttf
- KaTeX_SansSerif-Regular.woff
- KaTeX_SansSerif-Regular.woff2
- KaTeX_Script-Regular.ttf
- KaTeX_Script-Regular.woff
- KaTeX_Script-Regular.woff2
- KaTeX_Size1-Regular.ttf
- KaTeX_Size1-Regular.woff
- KaTeX_Size1-Regular.woff2
- KaTeX_Size2-Regular.ttf
- KaTeX_Size2-Regular.woff
- KaTeX_Size2-Regular.woff2
- KaTeX_Size3-Regular.ttf
- KaTeX_Size3-Regular.woff
- KaTeX_Size3-Regular.woff2
- KaTeX_Size4-Regular.ttf
- KaTeX_Size4-Regular.woff
- KaTeX_Size4-Regular.woff2
- KaTeX_Typewriter-Regular.ttf
- KaTeX_Typewriter-Regular.woff
- KaTeX_Typewriter-Regular.woff2
- VERSION
- bootstrap-icons.css
- bootstrap.min.css
- custom.css
- icons.css
- katex.min.css
- sidebars.css
- sidebar.html
- auto-render.min.js
- bootstrap.bundle.min.js
- custom.js
- jquery-3.4.1.slim.min.js
- katex.min.js
- mathjaxsetup.js
- BonitoPlotly.jl
- BonitoUI.jl
- ExportMATFunctions.jl
- ExportUI.jl
- FilePickerUI.jl
- SimulationUI.jl
- UIDefaults.jl
- ViewUI.jl
- WindowUI.jl
- KomaApp.jl
- KomaCLI.jl
- KomaMRI.jl
- KomaUI.jl
- Koma_signal.mrd
- Project.toml
- runtests.jl
- .gitattributes
- .gitignore
- .JuliaFormatter.toml
- AGENTS.md
- Artifacts.toml
- CITATION.cff
- CODE_OF_CONDUCT.md
- CONTRIBUTING.md
- LICENSE
- Project.toml
- README.md
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