covid19model

(★ 940)

Code for modelling estimated deaths and cases for COVID19.

File Explorer

  • .dockerignore
  • .gitattributes
  • .gitignore
  • base-Brazil.r
  • base-Italy.r
  • base-nature.r
  • base-usa-cases.r
  • base-usa.r
  • base.r
  • base_general.r
  • compute-ifr-europe.r
  • compute-ifr-usa.r
  • contributing.md
  • covariate-size-effects.r
  • covid19model.Rproj
  • environment.yml
  • LICENSE
  • make-table.r
  • plot-3-panel.r
  • plot-forecast.r
  • README.md
  • Technical_description_of_Imperial_COVID_19_Model.pdf
  • web-fetch-and-run.r
  • web-verify-output.r

# Use via CDN

jsDelivr

jsDelivr serves any public GitHub repository as a CDN with zero setup. Pick a version and a file to get a ready-to-paste link and snippet.

Command Glossary

Commands referenced in this DOCs, explained below.

🔍

conda activate

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Activate a conda environment.
See also: `conda deactivate`.

conda activate myenv

Activate an existing environment named `myenv`:

conda activate {{path/to/myenv}}

Activate an existing environment located at custom path:

conda activate --stack myenv

Stack `myenv` environment on top of a previous environment making libraries/commands/variables from both accessible:

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conda env

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Manage conda environments.

conda env create {{[-f|--file]}} {{path/to/file}}

Create an environment from an environment file (YAML, TXT, etc.):

conda env remove {{[-n|--name]}} {{environment_name}}

Delete an environment and everything in it:

conda env update {{[-f|--file]}} {{path/to/file}} --prune

Update an environment based on an environment file:

// repository documentation