BioMedQuery.jl
Julia utilities for interacting with biomedical databases and biomedical application programming interfaces (APIs)
File Explorer
- TagBot.yml
- before_install-osx.sh
- README.md
- 1_pubmed_search_and_save.md
- 2_umls_map_and_filter.md
- 4_pubmed_export_citations.md
- 5_load_medline.md
- bcbi_logo.jpeg
- pubmed_schema.jpg
- save_efetch_schema.jpeg
- umls_sn_schema.png
- pubmedsample18n0001_abstract_full.csv
- pubmedsample18n0001_abstract_structured.csv
- pubmedsample18n0001_author_ref.csv
- pubmedsample18n0001_basic.csv
- pubmedsample18n0001_mesh_desc.csv
- pubmedsample18n0001_mesh_heading.csv
- pubmedsample18n0001_mesh_qual.csv
- pubmedsample18n0001_pub_type.csv
- pubmedsample18n0001.xml.gz
- 11748933.bib
- 11748933.enw
- 1_pubmed_search_and_save.ipynb
- 2_umls_map_and_filter.ipynb
- 4_pubmed_export_citations.ipynb
- 5_load_medline.ipynb
- pmid_list.bib
- pmid_list.enw
- pubmed_obesity_2010_2012.db
- pubmed_obesity_2010_2012.enw
- ct.md
- dbutils.md
- examples.md
- index.md
- library.md
- processes.md
- pubmed.md
- make.jl
- Project.toml
- 1_pubmed_search_and_save.jl
- 2_umls_map_and_filter.jl
- 4_pubmed_export_citations.jl
- 5_load_medline.jl
- runexamples.jl
- CT.jl
- DBUtils.jl
- mysql_db_utils.jl
- sqlite_db_utils.jl
- medline_load.jl
- pubmed_export_citations.jl
- pubmed_mesh_to_umls_map.jl
- pubmed_occurrance_filtering.jl
- pubmed_search_and_save.jl
- citation_manager.jl
- eutils_sql_save.jl
- pubmed_sql_utils.jl
- pubmed_to_csv.jl
- BioMedQuery.jl
- ct.jl
- dbutils_mysql.jl
- dbutils_sqlite.jl
- efetch_sample.xml
- export_citations.jl
- processes_df.jl
- processes_mysql.jl
- processes_sqlite.jl
- pubmed.jl
- pubmed_parse.jl
- pubmedsample19n0001.xml.gz
- runtests.jl
- .gitignore
- .travis.yml
- bors.toml
- LICENSE
- Project.toml
- README.md
- ready.yml
- REQUIRE
- setup.cfg
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