tsinfer
Infer a tree sequence from genetic variation data.
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# Installation Guide
1. Get the code
git clone https://github.com/tskit-dev/tsinfer
Downloads the entire project code from GitHub to your computer.
cd tsinfer
Moves into the project folder you just downloaded.
2. Python
Easy RecommendedPrerequisites
python -m pip install tsinfer
Installs the Python libraries listed in requirements.txt (or similar).
If it runs without errors and prints output in the terminal, it worked.
Pulled directly from this repo's README.
3. Make
MediumPrerequisites
- Git Needed to download the project code from GitHub.
- Make Usually pre-installed on Linux/macOS. On Windows, install separately (e.g. via MSYS2 or WSL).
make
Compiles the code based on the generated build configuration to produce an executable.
If it finishes without errors, it worked. Try running the generated executable directly.
// repository documentation
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