nlmixr
nlmixr: an R package for population PKPD modeling
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Download Latest Version (.zip)- covr.yaml
- pkgdown.yaml
- R-CMD-check.yaml
- .gitignore
- icon_red.ico
- install.R
- installation-notes.rtf
- MUI_EXTRAPAGES.nsh
- nlmixr-header.bmp
- nlmixr-header.png
- nlmixr-welcome.bmp
- nlmixr-welcome.png
- nsis.R
- Oxygen-Icons.org-Oxygen-Apps-system-software-update.ico
- refresh.R
- shinyMixR.ico
- test_install.R
- update.nsddef
- update.nsdinc
- update.R
- Bolus_1CPT.rda
- Bolus_1CPTMM.rda
- Bolus_2CPT.rda
- Bolus_2CPTMM.rda
- Infusion_1CPT.rda
- invgaussian.rda
- metabolite.rda
- Oral_1CPT.rda
- pheno_sd.rda
- pump.rda
- rats.rda
- theo_md.rda
- theo_sd.rda
- Wang2007.rda
- warfarin.rda
- generic_ode_interface_template.txt
- generic_ode_interface_template_cov.txt
- lin_cmt.hpp
- nlmixr_types.h
- workaround.R
- CITATION
- COPYRIGHT
- nlmixr-template.docx
- quadrule.diff
- revision.txt
- THANKS
- TODOs.txt
- addCovariate.Rd
- addCovMultiple.Rd
- addCovVar.Rd
- addCwres.Rd
- addNpde.Rd
- addTable.Rd
- as.dynmodel.Rd
- as.focei.dynmodel.Rd
- as.focei.Rd
- as.nlme.Rd
- as.saem.Rd
- backwardSearch.Rd
- Bolus_1CPT.Rd
- Bolus_1CPTMM.Rd
- Bolus_2CPT.Rd
- Bolus_2CPTMM.Rd
- bootdata.Rd
- bootplot.Rd
- bootstrapFit.Rd
- boxCox.Rd
- calc.2LL.Rd
- calc.COV.Rd
- calcCov.Rd
- cholSE.Rd
- configsaem.Rd
- covarSearchAuto.Rd
- dot-nmGetData.Rd
- dynmodel.mcmc.Rd
- dynmodel.Rd
- dynmodelControl.Rd
- focei.eta.Rd
- focei.theta.Rd
- foceiControl.Rd
- foceiFit.Rd
- foceiFitCpp_.Rd
- forwardSearch.Rd
- frwd_selection.Rd
- gauss.quad.Rd
- gen_saem_user_fn.Rd
- getOMEGA.Rd
- gnlmm.Rd
- gof.Rd
- Infusion_1CPT.Rd
- ini.Rd
- initializeCovars.Rd
- instant.stan.extension.Rd
- invgaussian.Rd
- lin_cmt.Rd
- makeDummies.Rd
- makeHockeyStick.Rd
- metabolite.Rd
- model.Rd
- nlme_gof.Rd
- nlme_lin_cmpt.Rd
- nlme_ode.Rd
- nlmeModList.Rd
- nlmixr.Rd
- nlmixr_fit.Rd
- nlmixrAugPred.Rd
- nlmixrBounds.eta.names.Rd
- nlmixrBounds.focei.upper.lower.Rd
- nlmixrBounds.Rd
- nlmixrBoundsParser.Rd
- nlmixrData.Rd
- nlmixrDynmodelConvert.Rd
- nlmixrEst.Rd
- nlmixrfindLhs.Rd
- nlmixrGill83.Rd
- nlmixrGradFun.Rd
- nlmixrHess.Rd
- nlmixrLogo.Rd
- nlmixrPosthoc.Rd
- nlmixrPred.Rd
- nlmixrPrint.Rd
- nlmixrSim.Rd
- nlmixrTest.Rd
- nlmixrUI.dynmodelfun.Rd
- nlmixrUI.dynmodelfun2.Rd
- nlmixrUI.focei.fixed.Rd
- nlmixrUI.focei.inits.Rd
- nlmixrUI.nlme.specs.Rd
- nlmixrUI.nlme.var.Rd
- nlmixrUI.nlmefun.Rd
- nlmixrUI.Rd
- nlmixrUI.rxode.pred.Rd
- nlmixrUI.saem.ares.Rd
- nlmixrUI.saem.bres.Rd
- nlmixrUI.saem.cres.Rd
- nlmixrUI.saem.distribution.Rd
- nlmixrUI.saem.eta.trans.Rd
- nlmixrUI.saem.fit.Rd
- nlmixrUI.saem.fixed.Rd
- nlmixrUI.saem.init.omega.Rd
- nlmixrUI.saem.init.Rd
- nlmixrUI.saem.init.theta.Rd
- nlmixrUI.saem.log.eta.Rd
- nlmixrUI.saem.model.omega.Rd
- nlmixrUI.saem.model.Rd
- nlmixrUI.saem.res.mod.Rd
- nlmixrUI.saem.res.name.Rd
- nlmixrUI.saem.rx1.Rd
- nlmixrUI.saem.theta.name.Rd
- nlmixrUI.theta.pars.Rd
- nlmixrValidate.Rd
- nlmixrVersion.Rd
- nmDataConvert.Rd
- nmDocx.Rd
- nmLst.Rd
- nmsimplex.Rd
- ofv.Rd
- Oral_1CPT.Rd
- performNorm.Rd
- pheno_sd.Rd
- plot.dyn.mcmc.Rd
- plot.nlmixrFitData.Rd
- plot.saemFit.Rd
- preCondInv.Rd
- preconditionFit.Rd
- prediction.Rd
- print.dyn.ID.Rd
- print.dyn.mcmc.Rd
- print.gnlmm.fit.Rd
- print.nlmixrUI.Rd
- print.saemFit.Rd
- pump.Rd
- rats.Rd
- reexports.Rd
- removeCovariate.Rd
- removeCovMultiple.Rd
- removeCovVar.Rd
- residuals.nlmixrFitData.Rd
- saem.fit.Rd
- saemControl.Rd
- setCov.Rd
- setOfv.Rd
- sqrtm.Rd
- summary.dyn.ID.Rd
- summary.saemFit.Rd
- tableControl.Rd
- theo_md.Rd
- theo_sd.Rd
- traceplot.Rd
- VarCorr.nlmixrNlme.Rd
- vpc.Rd
- vpc_nlmixr_nlme.Rd
- vpc_saemFit.Rd
- vpc_ui.Rd
- Wang2007.Rd
- warfarin.Rd
- uif.R
- w2007.R
- apple-touch-icon-120x120.png
- apple-touch-icon-152x152.png
- apple-touch-icon-180x180.png
- apple-touch-icon-60x60.png
- apple-touch-icon-76x76.png
- apple-touch-icon.png
- favicon-16x16.png
- favicon-32x32.png
- favicon.ico
- 000.R
- autocovar.R
- bootstrap.R
- bounds.R
- broom.R
- complete.R
- cov.R
- data_bolus_1CPT.R
- data_bolus_1CPTMM.R
- data_bolus_2CPT.R
- data_bolus_2CPTMM.R
- data_infusion_1CPT.R
- data_oral_1CPT.R
- data_pheno_sd.R
- data_rats.R
- data_theo_md.R
- data_theo_sd.R
- data_Wang2007.R
- data_warfarin.R
- dynmodel.R
- foceiFit.R
- gauss.quad.R
- gnlmm.R
- gnlmm2.R
- huxtable.R
- instant.stan.extension.R
- invgaussian.R
- md5.R
- metabolite.R
- nlme_fit.R
- nlme_fit_gen.R
- nlmixr.R
- nlmixrGrad.R
- npde.R
- ofv.R
- pkpars.R
- plot.R
- precondition.R
- print.R
- pump.R
- RcppExports.R
- RcppManualExports.R
- reexports.R
- resid.R
- rxPipeline.R
- saem_fit.R
- saem_fit_aux.R
- simulate.R
- sourceCppFunction.R
- ui.R
- utils.R
- validate.R
- vpc.nlme.R
- vpc.R
- vpc.saemFit.R
- vpc.ui.R
- armahead.h
- censResid.cpp
- censResid.h
- cholse.cpp
- cwres.cpp
- cwres.h
- evaluate.h
- init.c
- inner.cpp
- ires.cpp
- ires.h
- lbfgsR.c
- lin_cmt.h
- Makevars.in
- merge3.c
- neldermead.cpp
- npde.cpp
- npde.h
- ode_cmt1.cpp
- PKPDLib_WW.h
- RcppExportMod.cpp
- RcppExports.cpp
- res.cpp
- res.h
- resid.cpp
- rprintf.c
- saem.cpp
- shrink.cpp
- shrink.h
- slice.cpp
- utilc.c
- utilc.h
- fn.txt
- Infusion_1CPT.csv
- Infusion_1CPTMM.csv
- Infusion_2CPT.csv
- Infusion_2CPTMM.csv
- Oral_1CPTMM.csv
- Oral_2CPT.csv
- Oral_2CPTMM.csv
- out.focei.prop.rds
- test-281.R
- test-307.R
- test-autocovar.R
- test-back-transform.R
- test-bootstrap.R
- test-bounds.R
- test-broom.R
- test-cov-focei.R
- test-dynmodel.R
- test-focei-cens.R
- test-focei-inner.R
- test-focei-wang2007.R
- test-issue-161.R
- test-issue-164.R
- test-issue-169.R
- test-issue-172.R
- test-issue-413.R
- test-issue-429.R
- test-issue-501.R
- test-issue-502.R
- test-issue-503.R
- test-keep.R
- test-mixed-pk-ode.R
- test-multiple-endpoint.R
- test-nimo-ui.R
- test-npde.R
- test-piping.R
- test-precondition.R
- test-saem-aic.R
- test-saem-cov-parsing.R
- test-saem-theo_sd.qs
- test-saem-theo_sd.R
- test-sens-fd.R
- test-table-cmt.R
- test-ui-bad-models.R
- test-ui-good-models.R
- test-ui-pred-err.R
- test-ui-saem.R
- testthat.R
- addingCovariances.Rmd
- broom.Rmd
- censoring.Rmd
- logo.png
- mavoglurant.Rmd
- Mavoglurant_A2121_nmpk.csv
- modelPiping.Rmd
- multiple-endpoints.Rmd
- nimo.Rmd
- nimo_fig1.PNG
- nimoData.rda
- nlmixr_report.docx
- nlmixr_report.pdf
- pbpk.png
- pheno.docx
- residualErrors.csv
- residualErrors.Rmd
- running_nlmixr.Rmd
- Simulated_WBC_pacl_ddmore_samePK_nlmixr.csv
- wbc.Rmd
- xgxr-nlmixr-ggpmx.Rmd
- .gitignore
- .Rbuildignore
- _pkgdown.yml
- CheatSheet_nlmixr.pdf
- cleanup
- cleanup.win
- codecov.yml
- configure
- configure.win
- cran-comments.md
- DESCRIPTION
- LICENSE
- logo.png
- NAMESPACE
- NEWS.md
- PosterACoP2016.pdf
- PosterACoP2017.pdf
- PosterPAGE2017.pdf
- README.md
- README.Rmd
// repository documentation
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