fly_ocr

(★ 9)

Printed-character recognition through a fixed fruit-fly connectome, with a small trained decoder, compound-eye replays and a full research report.

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- - ci.yml
- - heldout-predictions.npz
  - model-card.json
  - readout.npz
  - recognition.json
  - selection.json
- - protocol.json
  - validation.json
- - protocol.json
  - validation.json
- - chosen.json
  - protocol.json
  - readout.npz
  - validation.json
- - heldout-predictions.npz
  - model-card.json
  - readout.npz
  - recognition.json
  - selection.json
  - training-protocol.json
- - heldout-predictions.npz
  - model-card.json
  - readout.npz
  - recognition.json
  - selection.json
  - training-protocol.json
- - extraction.json
  - fresh-predictions.npz
  - fresh-recognition.json
  - fresh-reference.json
  - heldout-predictions.npz
  - input-benchmark.json
  - input-calibration.json
  - model-card.json
  - readout-raw64.npz
  - readout-sqrt128x64.npz
  - readout-sqrt64.npz
  - readout-sqrt64x32.npz
  - readout.npz
  - recognition.json
  - retina-uv.npy
  - selection.json
  - training-protocol.json
  - validation.json
- - heldout-predictions.npz
  - model-card.json
  - readout.npz
  - recognition.json
  - selection.json
- corpus-digits.json
- corpus-numeric.json
- graph-manifest.json
- retinal-atlas.json
- - manifest.json
- malecns-v1.json
- - calibrated-heading-end.png
  - calibrated-heading.png
  - calibrated-labels-end.png
  - calibrated-labels-more-end.png
  - calibrated-labels-more.png
  - calibrated-labels.png
  - cash-flow-end.png
  - cash-flow.png
  - credits-end.png
  - credits.png
  - fly-ocr.mp4
  - income-table-end.png
  - income-table.png
  - intro-end.png
  - intro.png
  - manifest.json
  - mapping-end.png
  - mapping.png
  - results-end.png
  - results.png
  - tilted-table-end.png
  - tilted-table.png
  - trained-labels-end.png
  - trained-labels.png
- - crop.png
  - predictions.csv
  - run.json
  - segmentation.json
  - segmentation.png
- - calibrated-heading-end.png
  - calibrated-heading-start.png
  - calibrated-heading.png
  - calibrated-labels-end.png
  - calibrated-labels-more-end.png
  - calibrated-labels-more-start.png
  - calibrated-labels-more.png
  - calibrated-labels-start.png
  - calibrated-labels.png
  - cash-flow-end.png
  - cash-flow-start.png
  - cash-flow.png
  - fly-ocr-social.mp4
  - income-table-end.png
  - income-table-start.png
  - income-table.png
  - manifest.json
  - tilted-table-end.png
  - tilted-table-start.png
  - tilted-table.png
  - trained-labels-end.png
  - trained-labels-start.png
  - trained-labels.png
- - calibrated-labels-end.png
  - calibrated-labels-more-end.png
  - calibrated-labels-more-start.png
  - calibrated-labels-more.png
  - calibrated-labels-start.png
  - calibrated-labels.png
  - fly-ocr-teaser.mp4
  - income-table-end.png
  - income-table-start.png
  - income-table.png
  - manifest.json
- flyocr-demo.mp4
- preview.png
- storyboard.md
- video-manifest.json
- - accuracy.png
  - adapter.png
  - cer.png
  - drive.png
  - dynamics.png
  - pipeline.png
  - readout.png
- additional-examples.md
- fly-ocr-research-report.pdf
- input-calibration.md
- letters-v2.md
- letters.md
- methods.md
- research-report.md
- results.md
- retinal-atlas.md
- social-video.md
- teaser-video.md
- - calibrated-examples.json
  - cash-flow-truth.json
  - evaluation.json
  - income-table-truth.json
  - letter-examples.json
  - letters-truth.json
  - more-examples.json
  - source.json
  - tilted-table-truth.json
  - trained-heading-truth.json
  - trained-labels-more-truth.json
  - trained-labels-truth.json
- DOOMFLY-MIT.txt
- - 039f9d75b33d15f2.json
  - 3d7e92e48a92b1e1.json
  - 77dfcbea40f8875b.json
  - 9718e3885f89e8ab.json
  - bc48046f59b8f7c1.json
  - c67cd798a62854a5.json
  - df966e1ee186d6d4.json
  - eb69125f6504ff46.json
  - protocol.json
  - results.json
  - selected.json
- - controls.json
- - selected.json
- - final-verification.json
  - installed-inference.json
  - installed-replay-verification.json
  - summary.json
  - trained-heading.json
  - trained-labels-more.json
  - trained-labels.json
  - training-samples.png
  - video-verification.json
- - calibrated-heading.json
  - calibrated-labels-more.json
  - calibrated-labels.json
  - cli-verification.json
  - final-verification.json
  - input-comparison.png
  - installed-inference.json
  - pdf-summary.json
  - summary.json
  - verification.json
  - video-verification.json
- - cash-flow.json
  - income-table.json
  - letters.json
  - summary.json
  - tilted-table.json
  - video-verification.json
- - 0aa790121a0dbc23.json
  - 1721e165bc0fc972.json
  - 1ba4d6846a608efb.json
  - 3c0c067cb25bbee5.json
  - 4cc469217a8c62f4.json
  - 7ef9418a894bdf4a.json
  - aec80ffd71fd0c3e.json
  - d14738c68e3f6123.json
  - d3dbf868b7c0952e.json
  - e8647bb4a4aeef95.json
  - e9565355be1486f9.json
  - f8d6d06787986152.json
  - protocol.json
  - results.json
  - selected.json
- - browser-verification.json
  - installed-inference.json
  - media-verification.json
  - replay-verification.json
  - social-media-verification.json
  - summary.json
  - teaser-media-verification.json
- - verification.json
- - coverage.png
  - protocol.json
  - results.json
- clean-install.json
- cnn.json
- digit-confusions.png
- fullgraph-diagnostics.json
- isolated-inference.json
- pdf-crop.json
- random-graph-benchmark.json
- training-glyphs.png
- video-verification.json
- 2026-09-12-retinal-coverage-and-accuracy.md
- 2026-09-12-segmentation-and-output-schema.md
- fly-brain-pdf-ocr.md
- retinal-coverage-diagnostic.py
- build-research-report.py
- build-retinal-atlas.py
- compare-kernel-readout.py
- evaluate-letters-v2.py
- export-compilation.py
- export-social.py
- export-teaser.py
- export-video.py
- extract-letters-v2.py
- fetch-example.py
- finalize-letter-readout.py
- fit-letters-v2.py
- freeze-pilot.py
- more-examples.py
- package-public.py
- preflight.py
- record-letters-v2.py
- record-letters.py
- refine-letter-readout.py
- report-figures.py
- train-letters-v2.py
- train-letters.py
- verify-example-videos.py
- verify-isolated-inference.py
- verify-public-media.py
- verify-recordings.py
- verify-social-media.py
- verify-teaser-media.py
- write-letter-results.py
- write-letter-v2-results.py
- write-results.py
- - __init__.py
  - cli.py
  - common.py
- test_calibrated_readout.py
- test_data.py
- test_feature_cache.py
- test_letters.py
- test_neural_dynamics.py
- test_pdf_pipeline.py
- test_readout.py
- test_replay.py
- test_retinal_atlas.py
- test_table.py
- - globals.css
  - page.tsx
- - replay.ts
  - retina.ts
  - social-fly.ts
  - social-layout.ts
  - social-timeline.ts
  - teaser-layout.ts
  - teaser-timeline.ts
  - utils.ts
- - favicon.svg
- - bundle.mjs
  - check-timeline.mjs
  - compilation.ts
  - export-social.mjs
  - export-teaser.mjs
  - export-video.ts
  - social-entry.ts
  - teaser-entry.ts
- .gitignore
- index.html
- main.tsx
- package-lock.json
- package.json
- README.md
- tsconfig.json
- vite.config.ts
.gitattributes
.gitignore
.python-version
CITATION.cff
LICENSE
MODEL_CARD.md
PUBLIC_MANIFEST.json
pyproject.toml
README.md
THIRD_PARTY_NOTICES.md
uv.lock

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